CreateFibril v 2.5 (released on Feb. 11th, 2015)
About:
CreateFibril is a tool to build atomic resolution models of protein fibrils.
Starting with the PDB file of an amyloid structure, one can specify the structural
parameters needed to build polymorphic fibrils. H-bond distances specify the
distances in angstroms between aggregated monomers on a fibril, rotation angels
specifies the fibril twist in degrees, and the polymorphism type selects the number
and orientation of the filaments making up the fibril.
Citation:
When citing this tool in any scientific publication please refer to it as:
Smaoui, Mohamed Raef, et al. "Computational Assembly of Polymorphic Amyloid Fibrils
Reveals Stable Aggregates." Biophysical journal 104.3 (2013): 683-693.
Copyright:
(c) 2014 Mohamed R. Smaoui, Jerome Waldispuhl
School of Computer Science, McGill University, 3630 University Street, Montreal, Canada
http://amyloid.cs.mcgill.ca
Download:
Command line version 2.5
The file contains a manual with examples to help you get started with
aggregating amyloids!